NaCl 10 g Yeast extract 5 g Peptone 10 g Add dH2O to 1000 ml Aliquot to 500ml flasks (250 ml per flask). Seal with sealfilm and autoclave them. Store at room temperature.
LA固體培養基
NaCl 10 g Yeast extract 5 g Peptone 10 g Agar powder 13 ~ 15 g Add dH2O to 1000 ml Aliquot to 500 ml flasks (250 ml per flask). Seal with sealfilm and autoclave them. Store at room temperature.
X-gal (20mg/ml) :
20mg X-gal 溶于 1ml 二甲基甲酰胺中, -20 ℃避光保存;
IPTG (200mg/ml) :
1g IPTG 溶于 4ml 去離子雙蒸水中,定容至 5ml ,過濾滅菌后 -20 ℃保存;
Amp ( 100mg/ml ):
1g Amp 溶于 4ml 去離子滅菌雙蒸水中,定容至 5ml , -20 ℃保存
二 質粒抽提試劑 - 返回 - Solution Ι Cell resuspension solution (50 mM Tris-HCl, pH 7.5, 10 mM EDTA, RNase A 100 μg/ml) 1 M Tris-HCl (pH 7.6) 2.5 ml 0.25 M EDTA 2.0 ml ddH2O 45 ml sterile by autoclave add 1% RNase 0.5ml store at room temperature
Solution Ⅱ Cell lysis solution (0.2 N NaOH, 1% SDS) Mix 0.4 N NaOH and 2% SDS in same volume.
Solution Ⅲ Neutralization solution (1.32 M potassium acetate, pH 5.2) 5 M potassium acetate 13.2 ml ddH2O 27 ml adjust pH to 5.2 add ddH2O to 50 ml sterile by autoclave store at room temperature
三 DNA 操作試劑 - 返回 - 1.5 × CTAB CTAB 15 g 1 M Tris · Cl (pH 8.0) 75 ml 0.5 M EDTA 30 ml NaCl 61.4 g add ddH2O to 1000 ml
0.5 M EDTA ( pH 8.0) EDTA-Na·2H2O 186.1 g NaOH 20 g Adjust to pH 8.0 ddH2O to 1000 ml sterilize by autoclaving
1 M Tris·HCl pH 7.4 pH 7.6 pH 8.0 Tris base 121.1 g 121.1 g 121.1 g Concentracted HCl 70 ml 64 ml 42 ml ddH2O to 1000 ml 1000 ml 1000 ml Sterilize by autoclaving
TE ( pH 8.0) Stock vol. 10 mM Tris·HCl ( pH 8.0) 1 M 10 ml 1 mM EDTA ( pH 8.0) 0.5 M 2 ml ddH2O to 1000 ml sterilize by autoclaving
10 M NH 4 Ac NH4Ac 385 g 770 g H2O to 500 ml 1000 ml
10 × PCR buffer stock vol. 500 mM KCl 2.5 M(sterilized) 200 ml 100 mM Tris-HCl 1 M pH 9.0 (sterilized) 100 ml 1% Triton X-100 100% 10 ml ddH2O 690 ml sterilize by autoclaving
5 × TBE Tris 54 g Boric acid 27.5 g 0.5 M EDTA ( pH 7.9) 20 ml ddH2O to 1000 ml
10 × TAE Tris 121.1 g 484.4 g EDTA(0.5 M) 20 ml 80 ml NaAc·3H2O 17 g 68 g glacial acetic acid 30 ml 200 ml adjust to pH 8.1 ddH2O to 1000 ml 4000 ml
NaOH 10 N 4 N NaOH 400 g 160 g ddH2O to 1000 ml 1000 ml
2 N HCl concentrated HCl 365 ml 182.5 ml ddH2O to 2000 ml 1000 ml
5 mg/ml ssDNA Salmon sperm DNA 1 g ddH2O to 200 ml
0.5 M P.B (phosphate Buffer) pH 6.8 Na2HPO4 16.44 g 131.52 g NaH2PO4 16.11 g 128.88 g ddH2O to 500 ml 4000 ml
20 × SSC NaCl 175.3 g 701.2 g Na3Citrate 88.2 g 352.8 g ddH2O to 1000 ml 4000 ml Sterilize by autoclaving
10% SDS SDS 100 g ddH2O to 1000 ml Heat to 68 ℃ to assist dissolution
50 × Denhart's Solution Ficoll 400 10 g PVP-360 10 g BSA (Fraction V) 10 g ddH2O to 1000 ml
Southern Blot Hybridization Buffer (Saghai , s Lab) Final conc. Stock Vol. 5 × SSC 20 × 250 ml 50 mM PB (pH 6.8) 0.5 M 100 ml 5 × Denhardt's 50 × 100 ml 2.5 mM EDTA (pH 8.0) 0.5 M 5 ml 100 μg/ml ssDNA 5 mg/ml 20 ml 0.4%SDS 20% 20 ml Dextran sulfate 50 g ddH2O to 1000 ml (Place a beaker on a stirrer, add these solution in the order of appearance one by one. SDS should be the very last item.)
Washing off Probe for Re-hybridization of Blots (I) Washing time: 10 min Final conc. Stock Vol. 0.1 × SSC 20 × SSC 20 ml 0.1% SDS 10% SDS 40 ml ddH2O to 4000 ml
Washing off Probe for Re-hybridization of Blots (II) Washing time: 3 min Final conc. Stock Vol. 0.1 N NaOH 10 N NaOH 40 ml 0.2% SDS 10% SDS 80 ml ddH2O to 4000 ml
Washing off Probe for Re-hybridization of Blots( Ⅲ ) Washing time: 20 min Final conc. Stock Vol. 0.2 M Tris. ( pH 7.5) 1 M Tris. (pH 7.5) 800 ml 0.1 × SSC 20 × SSC 20 ml 0.2% SDS 10% SDS 80 ml ddH2O to 4000 ml Blue Juice
Final conc. Stock Vol. Vol. 70% Glycerol 100% 35 ml 70 ml 0.5 × TBE 5 × 5 ml 10 ml 0.2% SDS 10% 1 ml 2 ml 20 mM EDTA 0.5 M 2 ml 4 ml 5 mg/ml Bromphenol Blue 0.25 g 0.5 g 5 mg/ml Xylene cyanol 0.25 g 0.5 g ddH2O to 50 ml 100 ml
EB (10 mg/ml) ehidium bromide 1 g ddH2O to 100 ml Stir on a magnetic stirrer for several hours. Transfer the solution to a dark bottle and store at 4 ℃ . The concentration of work solution: 0.5 μg/μl (50 μl stock solution In 1000 ml dH2O). Decontamination of EB Reduce the concentration of EB < 0.5 mg/ml, add 1 volume of 0.5 M KMnO4 ,mix carefully then add 1 volume of 2.5 N HCl, mix carefully and allow the solution to stand at room temperature for several hours. Add 1 volume of 2.5 N NaOH, mix and discard